BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB032B11LP1|AL429527
(874 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1339 1733 0.0
>3x_Contig1339
Length = 6194
Score = 1733 bits (874), Expect = 0.0
Identities = 874/874 (100%)
Strand = Plus / Minus
Query: 1 cgtacttcatagcacttttataattggtggcagcgtattgcttgtaagtttgttcgatca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4637 cgtacttcatagcacttttataattggtggcagcgtattgcttgtaagtttgttcgatca 4578
Query: 61 atgaattcatttcattttcgaacgcgatgtcaaagaatccatactctgagtcggtacgca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4577 atgaattcatttcattttcgaacgcgatgtcaaagaatccatactctgagtcggtacgca 4518
Query: 121 aattcccaatgtccttgaccatttcttcggcccattctttcaagttatagagtcttagaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4517 aattcccaatgtccttgaccatttcttcggcccattctttcaagttatagagtcttagaa 4458
Query: 181 tagcagcattagcattagattcatccaagttggcatcttcaacagtgtcacctgcatcag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4457 tagcagcattagcattagattcatccaagttggcatcttcaacagtgtcacctgcatcag 4398
Query: 241 caagagcaatacgggaagcatcggcaccgaatttcgtcaccatgtcgtgcaaagtcatga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4397 caagagcaatacgggaagcatcggcaccgaatttcgtcaccatgtcgtgcaaagtcatga 4338
Query: 301 agttacctgtagacttggacatcttagcattgttcaacatcaaatgaccgttgactctga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4337 agttacctgtagacttggacatcttagcattgttcaacatcaaatgaccgttgactctga 4278
Query: 361 taccctttggccagaactttcttgggaacaatgcaacgtgagtgtagataaagaaggtca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4277 taccctttggccagaactttcttgggaacaatgcaacgtgagtgtagataaagaaggtca 4218
Query: 421 agtggtttggaatcaaatccttaccagaaatggaaacatccaatgggtagaagtattcga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4217 agtggtttggaatcaaatccttaccagaaatggaaacatccaatgggtagaagtattcga 4158
Query: 481 actctcttctcaatttttgcaaagattctaatgggatatcagtgtttttcacttcatcga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4157 actctcttctcaatttttgcaaagattctaatgggatatcagtgtttttcacttcatcga 4098
Query: 541 cgtgttggaagacatagtcaaacacttcatctgtcatttgttctgctttgattcccaatg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4097 cgtgttggaagacatagtcaaacacttcatctgtcatttgttctgctttgattcccaatg 4038
Query: 601 gaccaatttcgttaccgtagtaatctttgaataataaatgcgcaatggtatagaaggatt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4037 gaccaatttcgttaccgtagtaatctttgaataataaatgcgcaatggtatagaaggatt 3978
Query: 661 ggtagatagtagagtcagacaaagattcaaccaaatactttggatcccatggtaatctgg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3977 ggtagatagtagagtcagacaaagattcaaccaaatactttggatcccatggtaatctgg 3918
Query: 721 tacctagaccgtaactacgagaaacagcccagtttctcaaccaatctaagacactttcga 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3917 tacctagaccgtaactacgagaaacagcccagtttctcaaccaatctaagacactttcga 3858
Query: 781 aggcattcttaacttcaggagcaaagagttccataccttccaaacattcaatagcttgtt 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3857 aggcattcttaacttcaggagcaaagagttccataccttccaaacattcaatagcttgtt 3798
Query: 841 tcttccattcttcttcaccgtagtcgacatacca 874
||||||||||||||||||||||||||||||||||
Sbjct: 3797 tcttccattcttcttcaccgtagtcgacatacca 3764
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7289
Number of Sequences: 1807
Number of extensions: 7289
Number of successful extensions: 48
Number of sequences better than 1.0e-20: 1
length of query: 874
length of database: 10,358,551
effective HSP length: 16
effective length of query: 858
effective length of database: 10,329,639
effective search space: 8862830262
effective search space used: 8862830262
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)